BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029B08LP1|AL429017
(903 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1510 1760 0.0
>3x_Contig1510
Length = 10278
Score = 1760 bits (887), Expect = 0.0
Identities = 900/904 (99%), Gaps = 1/904 (0%)
Strand = Plus / Plus
Query: 1 ttcatttcgcaacttttttgatattatacaaattttttttcaaggcatttataggcgtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1115 ttcatttcgcaacttttttgatattatacaaattttttttcaaggcatttataggcgtta 1174
Query: 61 s-gatggatggtggttcaattctgctgtaataaggctaactgaccgacctcataccattc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1175 gcgatggatggtggttcaattctgctgtaataaggctaactgaccgacctcataccattc 1234
Query: 120 tgttgcatcagcccttgggaaatggttgtagggttcaatttaagcgctactttgaacgta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1235 tgttgcatcagcccttgggaaatggttgtagggttcaatttaagcgctactttgaacgta 1294
Query: 180 gccagattgttcaaagatcctaaactatgcattcccagtataaagtatgcgaatttcaat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1295 gccagattgttcaaagatcctaaactatgcattcccagtataaagtatgcgaatttcaat 1354
Query: 240 gagatacaattacctttaccgagtcacatcaaagccatagtccttgataaggacaactgt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1355 gagatacaattacctttaccgagtcacatcaaagccatagtccttgataaggacaactgt 1414
Query: 300 ttcgcaaaaccacatgacgacaaagtatggcctgaatatcaagaacaatgggataaattg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1415 ttcgcaaaaccacatgacgacaaagtatggcctgaatatcaagaacaatgggataaattg 1474
Query: 360 aaacagttgtacccggggaaaaagttgctaatcgtcagtgacagtgcaggcacgaacgat 419
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1475 aaacagttgtacccggggaaaaagttgctaatcgtcagtaacagtgcaggcacgaacgat 1534
Query: 420 gatattggacacattcaggcgaagacactggagaagagcactggcgtaccagtgctctng 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1535 gatattggacacattcaggcgaagacactggagaagagcactggcgtaccagtgctcttg 1594
Query: 480 cattcgattaagaaaccaggatgccatgtcgaaatcatggcctacttcaagaaaagcaag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1595 cattcgattaagaaaccaggatgccatgtcgaaatcatggcctacttcaagaaaagcaag 1654
Query: 540 gtatgtgaagatccatccgaggtcgcagtggtgggtgacaggttattcaccgatgtggta 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1655 gtatgtgaagatccatccgaggtcgcagtggtgggtgacaggttattcaccgatgtggta 1714
Query: 600 atggctaacacaatgggtgcatactctgtgtggttacatgaaggagtcatcaagagctct 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1715 atggctaacacaatgggtgcatactctgtgtggttacatgaaggagtcatcaagagctct 1774
Query: 660 aatccgtttgtgttgctcgagcagcaggtgtataattggttgcaaaggtgattgccaggc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1775 aatccgtttgtgttgctcgagcagcaggtgtataattggttgcaaaggtgattgccaggc 1834
Query: 720 gcctgatggcagttcatctaacttctgtggttaaatgaatatttatgtcacgtgactgta 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1835 gcctgatggcagttcatctaacttctgtggttaaatgaatatttatgtcacgtgactgta 1894
Query: 780 tacgtcacgtgactccaacttatgaaccaaccttcttcttctccccagtaaatcccacat 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1895 tacgtcacgtgactccaacttatgaaccaaccttcttcttctccccagtaaatcccacat 1954
Query: 840 aattcatctggtgcaaatactactcatacttggcgtcccacatcagctgaaatacacttt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1955 aattcatctggtgcaaatactactcatacttggcgtcccacatcagctgaaatacacttt 2014
Query: 900 gact 903
||||
Sbjct: 2015 gact 2018
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6442
Number of Sequences: 1807
Number of extensions: 6442
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 903
length of database: 10,358,551
effective HSP length: 16
effective length of query: 887
effective length of database: 10,329,639
effective search space: 9162389793
effective search space used: 9162389793
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)